PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68093.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 150aa    MW: 16871.3 Da    PI: 9.9174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68093.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-10858153
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53
                r+ +h  +Er RR+++   ++ Lr+llP        +K s ++   +Av+YIk+
  EPS68093.1  8 RKIMHRDIERHRRQEMAGLYSSLRSLLPVeY---IRGKRSISDHMFEAVNYIKN 58
                6789*************************77...******************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.12E-8664No hitNo description
SuperFamilySSF474592.62E-11675IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.189759IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-7858IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-7983IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
SSDGFKQRKI MHRDIERHRR QEMAGLYSSL RSLLPVEYIR GKRSISDHMF EAVNYIKNTE  60
KRIEELCRRR DNLKRLRTSA EQQQSVRKDT AAPFTVNVNN SGAGIEAVIC CGSGVPLSGI  120
LIELVGAGLS VVSSVSTRID EKFIHVLQAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076502.14e-44PREDICTED: transcription factor bHLH126-like
TrEMBLS8DXU21e-107S8DXU2_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc03g006910.2.11e-37(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-32bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]